STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tprkbTP53RK binding protein. (174 aa)    
Predicted Functional Partners:
osgep
O-sialoglycoprotein endopeptidase.
    
 0.999
tp53rk
TP53 regulating kinase.
   
 0.999
ENSECRP00000016100
annotation not available
    
 0.991
osgepl1
O-sialoglycoprotein endopeptidase like 1.
    
 0.989
nup43
Nucleoporin 43.
    
   0.683
gnl2
G protein nucleolar 2.
      
 0.564
ENSECRP00000012474
annotation not available
   
    0.558
fancm
FA complementation group M.
      
 0.540
LOC114662514
Uncharacterized LOC114662514.
      
 0.472
yrdc
yrdC N6-threonylcarbamoyltransferase domain containing.
      
 0.472
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.