STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srfbp1Serum response factor binding protein 1. (440 aa)    
Predicted Functional Partners:
pwp2
PWP2 small subunit processome component.
   
 0.994
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.994
wdr3
WD repeat domain 3.
   
  0.993
wdr36
WD repeat domain 36.
   
  0.992
noc4l
Nucleolar complex associated 4 homolog.
   
  0.991
utp6
UTP6 small subunit processome component.
   
  0.989
bysl
Bystin like.
   
 0.988
bms1
BMS1 ribosome biogenesis factor.
   
  0.988
tbl3
Transducin beta like 3.
   
  0.988
utp18
UTP18 small subunit processome component.
   
  0.988
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.