Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sdr16c5Short chain dehydrogenase/reductase family 16C member 5. (305 aa)    
Predicted Functional Partners:
LOC114646944
Cytochrome P450 26A1.
  
 
 0.947
dgat1
Diacylglycerol O-acyltransferase 1.
     
 0.919
LOC114651640
Cytochrome P450 26B1.
  
 
 0.918
lrat
Lecithin retinol acyltransferase.
   
 0.906
LOC114655916
Cytochrome P450 27C1-like.
  
 
 0.899
LOC114665146
All-trans-retinol 13,14-reductase-like.
    
 0.897
retsat
Retinol saturase.
    
 0.897
pnpla4
Patatin like phospholipase domain containing 4.
     
 0.893
soat2
Sterol O-acyltransferase 2.
     
 0.891
soat1
Sterol O-acyltransferase 1.
     
 0.891
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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