STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114647975Plasma membrane calcium-transporting ATPase 4-like. (791 aa)    
Predicted Functional Partners:
pln
Phospholamban.
    
 0.813
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
   
 
 0.737
prkaca
Protein kinase cAMP-activated catalytic subunit alpha.
   
 
 0.737
atp2c2
ATPase secretory pathway Ca2+ transporting 2.
  
 
0.696
atp2c1
ATPase secretory pathway Ca2+ transporting 1.
  
 
0.694
LOC114659669
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2-like.
  
 
0.690
atp2a1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1.
  
 
0.689
LOC114655788
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like.
  
 
0.689
LOC114659151
Putative cation exchanger C521.04c.
   
 
 0.688
atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2.
  
 
0.687
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.