STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tubgcp3Tubulin gamma complex associated protein 3. (893 aa)    
Predicted Functional Partners:
tubg1
Tubulin gamma 1.
   
 0.999
tubgcp5
Tubulin gamma complex associated protein 5.
    
0.999
ENSECRP00000026594
annotation not available
    
 0.999
tubgcp2
Tubulin gamma complex associated protein 2.
   
0.999
tubgcp6
Tubulin gamma complex associated protein 6.
   
0.998
ENSECRP00000031865
annotation not available
   
0.998
tubd1
Tubulin delta 1.
   
 0.964
tmem183a
Transmembrane protein 183A.
    
 0.959
acadm
acyl-CoA dehydrogenase medium chain.
   
 0.952
acad8
acyl-CoA dehydrogenase family member 8.
   
 0.952
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.