STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem70Transmembrane protein 70. (280 aa)    
Predicted Functional Partners:
ecsit
ECSIT signaling integrator.
    
 
 0.969
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
    
 
 0.958
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
  
   
 0.634
ndufaf4
NADH:ubiquinone oxidoreductase complex assembly factor 4.
   
  
 0.599
atpaf2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
  
 0.578
tmem186
Transmembrane protein 186.
      
 0.563
dmac2
Distal membrane arm assembly complex 2.
      
 0.562
tmem214
Transmembrane protein 214.
      
 0.562
foxred1
FAD dependent oxidoreductase domain containing 1.
      
 0.561
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.555
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.