STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000007820annotation not available (431 aa)    
Predicted Functional Partners:
ENSECRP00000007797
annotation not available
 
     0.922
LOC114665841
Serine/threonine-protein kinase ICK-like.
    
 0.842
ENSECRP00000026579
annotation not available
    
 0.842
mok
MOK protein kinase.
    
 0.842
spo11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.744
ENSECRP00000001075
annotation not available
    
 
 0.443
knl1
Kinetochore scaffold 1.
    
 
 0.409
rad51c
RAD51 paralog C.
    
 
 0.409
dmc1
DNA meiotic recombinase 1.
    
 
 0.409
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.