STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000008275annotation not available (387 aa)    
Predicted Functional Partners:
gng13
G protein subunit gamma 13.
    
  0.746
arrb2
Arrestin beta 2.
   
 0.712
LOC114649976
Beta-arrestin-1.
   
 0.712
sag
S-antigen visual arrestin.
   
 0.712
ENSECRP00000020140
annotation not available
   
 0.712
ppef2
Protein phosphatase with EF-hand domain 2.
    
 0.685
ppef1
Protein phosphatase with EF-hand domain 1.
    
 0.685
LOC114652196
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.683
LOC114652197
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.683
LOC114662752
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.683
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.