STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatbglutamyl-tRNA amidotransferase subunit B. (552 aa)    
Predicted Functional Partners:
faah2
Fatty acid amide hydrolase 2.
  
 0.999
dars2
aspartyl-tRNA synthetase 2, mitochondrial.
 
 0.999
faah
Fatty acid amide hydrolase.
  
 0.999
dars1
aspartyl-tRNA synthetase 1.
 
 0.995
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 0.989
nars1
asparaginyl-tRNA synthetase 1.
 
 0.984
nars2
asparaginyl-tRNA synthetase 2, mitochondrial.
  
 0.977
gatc
glutamyl-tRNA amidotransferase subunit C.
    
 0.975
gmps
Guanine monophosphate synthase.
  
 
 0.974
ENSECRP00000017390
annotation not available
  
 0.973
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.