STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptger4Prostaglandin E receptor 4. (462 aa)    
Predicted Functional Partners:
gnal
G protein subunit alpha L.
    
 0.973
gnas
GNAS complex locus.
    
 0.973
ENSECRP00000021845
annotation not available
   
 
0.933
gnb5
G protein subunit beta 5.
    
  0.933
gng2
G protein subunit gamma 2.
    
  0.928
gng4
G protein subunit gamma 4.
    
  0.928
gnb2
G protein subunit beta 2.
    
  0.919
LOC114646404
Guanine nucleotide-binding protein subunit beta-4.
    
  0.919
gnb3
G protein subunit beta 3.
    
  0.919
LOC114666806
Prostaglandin E2 receptor EP2 subtype-like.
     
0.907
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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