STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114653337Serine/threonine-protein kinase Sgk3. (485 aa)    
Predicted Functional Partners:
kdm6b
Lysine demethylase 6B.
   
 0.956
kdm6a
Lysine demethylase 6A.
   
 0.956
pdpk1
3-phosphoinositide dependent protein kinase 1.
    
0.948
prkdc
Protein kinase, DNA-activated, catalytic subunit.
    
 0.936
smg1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
 0.936
mtor
Mechanistic target of rapamycin kinase.
    
 0.936
foxo3
Forkhead box O3.
    
 0.880
ENSECRP00000017522
annotation not available
    
 0.880
foxo4
Forkhead box O4.
    
 0.880
ENSECRP00000009233
annotation not available
    
 0.861
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.