STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000008526annotation not available (281 aa)    
Predicted Functional Partners:
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.941
nup93
Nucleoporin 93.
   
 0.914
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.864
coasy
Coenzyme A synthase.
  
 
 0.859
med14
Mediator complex subunit 14.
    
 0.846
med23
Mediator complex subunit 23.
    
 0.845
got2
Glutamic-oxaloacetic transaminase 2.
    
 0.840
med17
Mediator complex subunit 17.
    
 0.837
med4
Mediator complex subunit 4.
   
 0.828
med10
Mediator complex subunit 10.
    
 0.823
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.