STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
noc2lNOC2 like nucleolar associated transcriptional repressor. (698 aa)    
Predicted Functional Partners:
mak16
MAK16 homolog.
   
 0.999
brix1
Biogenesis of ribosomes BRX1.
   
 0.999
noc3l
NOC3 like DNA replication regulator.
   
 0.999
rrp1b
Ribosomal RNA processing 1B.
   
 0.999
cebpz
CCAAT enhancer binding protein zeta.
   
 0.999
gtpbp4
GTP binding protein 4.
   
 0.999
ftsj3
FtsJ RNA 2'-O-methyltransferase 3.
   
 0.999
wdr74
WD repeat domain 74.
   
 0.999
wdr12
WD repeat domain 12.
   
 0.999
mrto4
MRT4 homolog, ribosome maturation factor.
   
 0.999
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.