STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114662544NAD-dependent protein deacetylase sirtuin-3-like. (388 aa)    
Predicted Functional Partners:
sirt4
Sirtuin 4.
  
 
0.920
sirt5
Sirtuin 5.
  
 
0.918
sirt1
Sirtuin 1.
  
 
0.907
nadsyn1
NAD synthetase 1.
    
 0.892
nudt12
Nudix hydrolase 12.
   
 0.887
sirt6
Sirtuin 6.
  
  
0.886
ENSECRP00000009957
annotation not available
   
 0.885
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
   
 0.885
nampt
Nicotinamide phosphoribosyltransferase.
     
 0.882
sirt7
Sirtuin 7.
  
  
0.880
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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