STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000009013annotation not available (112 aa)    
Predicted Functional Partners:
zdhhc4
Zinc finger DHHC-type containing 4.
      
 0.555
selenok
Selenoprotein K.
      
 0.553
ENSECRP00000018273
annotation not available
      
 0.519
tectb
Tectorin beta.
      
 0.507
zdhhc24
Zinc finger DHHC-type containing 24.
    
 
 0.482
zdhhc21
Zinc finger DHHC-type containing 21.
    
 
 0.474
zdhhc22
Zinc finger DHHC-type containing 22.
    
 
 0.474
golga7
Golgin A7.
      
 0.443
ccdc186
Coiled-coil domain containing 186.
      
 0.438
ENSECRP00000020559
annotation not available
      
 0.438
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.