STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000009143annotation not available (220 aa)    
Predicted Functional Partners:
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
 0.863
snrpe
Small nuclear ribonucleoprotein polypeptide E.
    
 0.764
asns
Asparagine synthetase (glutamine-hydrolyzing).
     
 0.752
got2
Glutamic-oxaloacetic transaminase 2.
     
 0.726
rimkla
Ribosomal modification protein rimK like family member A.
     
 0.718
LOC114658004
Beta-citrylglutamate synthase B-like.
     
 0.718
ass1
Argininosuccinate synthase 1.
   
 
  0.707
LOC114659638
N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming)-like.
   
 
 0.671
acy3
Aminoacylase 3.
   
 
 0.671
aspa
Aspartoacylase.
   
 
 0.671
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.