STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hes1Hes family bHLH transcription factor 1. (264 aa)    
Predicted Functional Partners:
fancl
FA complementation group L.
    
 0.960
fancg
FA complementation group G.
    
 0.959
fanca
FA complementation group A.
    
 0.959
ENSECRP00000030430
annotation not available
    
 0.959
fancc
FA complementation group C.
    
  0.958
rpl10a
Ribosomal protein L10a.
    
  0.867
fance
FA complementation group E.
    
  0.867
ube2t
Ubiquitin conjugating enzyme E2 T.
    
  0.822
hes4
Hes family bHLH transcription factor 4.
  
  
 
0.819
fancd2
FA complementation group D2.
     
 0.817
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.