STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnih2Cornichon family AMPA receptor auxiliary protein 2. (160 aa)    
Predicted Functional Partners:
gria2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.943
LOC114666865
Voltage-dependent calcium channel gamma-4 subunit-like.
   
 0.917
gria3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.838
gria4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.837
ENSECRP00000005134
annotation not available
    
 0.837
gria1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.837
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.808
tmed2
Transmembrane p24 trafficking protein 2.
    
 0.740
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
  
  
0.712
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
  
  
0.703
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.