STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lsg1Large 60S subunit nuclear export GTPase 1. (651 aa)    
Predicted Functional Partners:
LOC114646319
60S ribosomal export protein NMD3-like.
   
 
 0.996
eif6
Eukaryotic translation initiation factor 6.
   
 0.992
gtpbp4
GTP binding protein 4.
   
 0.991
pa2g4
Proliferation-associated 2G4.
  
 0.990
rsl24d1
Ribosomal L24 domain containing 1.
   
 0.984
ftsj3
FtsJ RNA 2'-O-methyltransferase 3.
   
 0.983
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.981
sdad1
SDA1 domain containing 1.
   
 
 0.978
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.978
rpl23a
Ribosomal protein L23a.
    
 0.978
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.