STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000009637annotation not available (492 aa)    
Predicted Functional Partners:
aldh18a1
Aldehyde dehydrogenase 18 family member A1.
    
 0.894
eprs1
glutamyl-prolyl-tRNA synthetase 1.
    
 0.881
LOC114648548
Cytochrome b5 reductase 4.
   
 
  0.835
abat
4-aminobutyrate aminotransferase.
  
 0.808
gad2
Glutamate decarboxylase 2.
  
0.773
cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
   
 0.752
cdo1
Cysteine dioxygenase type 1.
     
 0.751
LOC114668034
Glutaminase liver isoform, mitochondrial-like.
  
 
 0.743
glud1
Glutamate dehydrogenase 1.
  
 
 0.740
LOC114668691
Aldehyde dehydrogenase family 3 member B1-like.
  
 0.727
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.