STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndufs1NADH:ubiquinone oxidoreductase core subunit S1. (733 aa)    
Predicted Functional Partners:
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.999
ndufa9
NADH:ubiquinone oxidoreductase subunit A9.
  
 0.999
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
 
 0.999
ndufa12
NADH:ubiquinone oxidoreductase subunit A12.
   
 0.999
ndufb3
NADH:ubiquinone oxidoreductase subunit B3.
   
 0.999
ndufv1
NADH:ubiquinone oxidoreductase core subunit V1.
 
 0.999
ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
 
 0.999
LOC114659398
Cytochrome c1, heme protein, mitochondrial.
   
 0.999
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
   
 0.999
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
   
 0.999
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.