STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem201Transmembrane protein 201. (660 aa)    
Predicted Functional Partners:
sun1
Sad1 and UNC84 domain containing 1.
    
 
 0.613
sun2
Sad1 and UNC84 domain containing 2.
    
 
 0.613
sbk1
SH3 domain binding kinase 1.
      
 0.561
coq4
Coenzyme Q4.
      
 0.483
eapp
E2F associated phosphoprotein.
      
 0.452
emg1
EMG1 N1-specific pseudouridine methyltransferase.
      
 0.428
thyn1
Thymocyte nuclear protein 1.
      
 0.428
LOC114665292
Serine/threonine-protein kinase SBK1-like.
      
 0.420
tmtc3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.410
lemd3
LEM domain containing 3.
      
 0.405
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.