STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000009796annotation not available (666 aa)    
Predicted Functional Partners:
LOC114654822
E3 ubiquitin-protein ligase DTX3L-like.
   
 
 0.870
ENSECRP00000022332
annotation not available
   
 
 0.870
dtx3
Deltex E3 ubiquitin ligase 3.
   
 
 0.791
LOC114645750
Protein mono-ADP-ribosyltransferase PARP14-like.
 
 
 
0.704
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.631
LOC114646247
Core histone macro-H2A.2-like.
  
 
 
 0.603
LOC114655513
Protein mono-ADP-ribosyltransferase PARP14-like.
  
 
0.592
hdac11
Histone deacetylase 11.
   
 0.580
ifi35
Interferon induced protein 35.
   
  
 0.578
aifm1
Apoptosis inducing factor mitochondria associated 1.
  
 0.568
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.