STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000009863annotation not available (324 aa)    
Predicted Functional Partners:
ENSECRP00000019770
annotation not available
   
 
 0.799
edn1
Endothelin 1.
    
 0.786
ENSECRP00000012409
annotation not available
    
  0.784
LOC114668645
Ghrelin-like.
    
 0.754
LOC114644253
Somatostatin-like.
    
  0.748
ENSECRP00000000076
annotation not available
  
 
0.708
gnai3
G protein subunit alpha i3.
    
  0.708
LOC114659384
Guanine nucleotide-binding protein G(i) subunit alpha-1.
    
  0.708
gnao1
G protein subunit alpha o1.
    
  0.708
LOC114664441
Guanine nucleotide-binding protein G(o) subunit alpha-like.
    
  0.708
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.