STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000010021annotation not available (357 aa)    
Predicted Functional Partners:
LOC114663558
Tumor necrosis factor receptor superfamily member 16-like.
    
 0.835
adgrl3
Adhesion G protein-coupled receptor L3.
    
  0.791
adgrl2
Adhesion G protein-coupled receptor L2.
    
  0.791
LOC114668254
Adhesion G protein-coupled receptor L1-like.
    
  0.791
ENSECRP00000031034
annotation not available
    
  0.791
ENSECRP00000031052
annotation not available
    
  0.791
ntng1
Netrin G1.
    
 0.752
ENSECRP00000011256
annotation not available
    
  0.731
cask
Calcium/calmodulin dependent serine protein kinase.
   
  0.665
LOC114668841
Reticulon-4 receptor-like.
    
 
 0.655
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.