STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114655268Cytochrome P450 20A1. (460 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
    
 0.853
ENSECRP00000019819
annotation not available
    
 0.839
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.828
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.823
lss
Lanosterol synthase.
   
 0.809
ENSECRP00000017927
annotation not available
     
 0.793
LOC114651172
Probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein.
    
 0.780
LOC114648548
Cytochrome b5 reductase 4.
   
 0.777
kmo
Kynurenine 3-monooxygenase.
  
 0.764
sc5d
sterol-C5-desaturase.
  
 0.753
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.