STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddi2DNA damage inducible 1 homolog 2. (420 aa)    
Predicted Functional Partners:
LOC114662601
Polyubiquitin-like.
   
 
 0.918
rps27a
Ribosomal protein S27a.
   
 
 0.830
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 
 0.765
psmd2
Proteasome 26S subunit, non-ATPase 2.
    
 
 0.736
rad23b
RAD23 homolog B, nucleotide excision repair protein.
   
 
 0.716
rad23a
RAD23 homolog A, nucleotide excision repair protein.
   
 
 0.716
LOC114662840
UV excision repair protein RAD23 homolog A-like.
   
 
 0.716
LOC114644895
UV excision repair protein RAD23 homolog B-like.
   
 
 0.716
ENSECRP00000009890
annotation not available
   
 
 0.656
ubqln1
Ubiquilin 1.
   
 
 0.619
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.