STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncaph2non-SMC condensin II complex subunit H2. (621 aa)    
Predicted Functional Partners:
ncapg2
non-SMC condensin II complex subunit G2.
   
 0.999
smc2
Structural maintenance of chromosomes 2.
   
 0.999
ncapd3
non-SMC condensin II complex subunit D3.
   
 0.999
smc4
Structural maintenance of chromosomes 4.
   
 0.998
ncapd2
non-SMC condensin I complex subunit D2.
   
 0.979
ncaph
non-SMC condensin I complex subunit H.
   
 
 0.977
ncapg
non-SMC condensin I complex subunit G.
   
 0.975
smc1a
Structural maintenance of chromosomes 1A.
   
 0.906
smc3
Structural maintenance of chromosomes 3.
   
 0.900
smc6
Structural maintenance of chromosomes 6.
   
 0.889
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.