STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114659740Uncharacterized LOC114659740. (283 aa)    
Predicted Functional Partners:
bag3
BCL2 associated athanogene 3.
   
 0.902
ENSECRP00000001571
annotation not available
   
 0.882
gak
Cyclin G associated kinase.
   
 0.882
ube2v1
Ubiquitin conjugating enzyme E2 V1.
   
  0.853
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.827
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.813
clpb
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.779
tsc1
TSC complex subunit 1.
  
 0.756
trap1
TNF receptor associated protein 1.
  
 0.756
LOC114666696
Heat shock protein HSP 90-alpha.
  
 0.756
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.