STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnfrsf6bTNF receptor superfamily member 6b. (292 aa)    
Predicted Functional Partners:
ENSECRP00000031107
annotation not available
    
 0.989
faslg
Fas ligand.
    
 0.986
cd40lg
CD40 ligand.
    
 0.930
tnfsf15
TNF superfamily member 15.
   
 0.897
tnfsf11
TNF superfamily member 11.
    
 0.857
LOC114663661
Tumor necrosis factor receptor superfamily member 11B-like.
  
  
 
0.837
ENSECRP00000000619
annotation not available
   
 0.713
LOC114650683
Tumor necrosis factor-like.
   
 0.713
diablo
Diablo IAP-binding mitochondrial protein.
    
  0.612
LOC114653552
Tumor necrosis factor receptor superfamily member 11A-like.
   
0.573
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.