STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114656735Transcription factor HES-5-like. (149 aa)    
Predicted Functional Partners:
hes2
Hes family bHLH transcription factor 2.
     
0.725
hes4
Hes family bHLH transcription factor 4.
     
0.704
hes1
Hes family bHLH transcription factor 1.
     
0.704
ENSECRP00000012806
annotation not available
     
0.704
fancc
FA complementation group C.
    
  0.703
fancg
FA complementation group G.
    
  0.703
ENSECRP00000030430
annotation not available
    
  0.703
fancl
FA complementation group L.
    
  0.703
LOC114647579
Transcription cofactor HES-6-like.
     
0.687
LOC114642918
Transcription cofactor HES-6-like.
     
0.686
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.