STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gp1baGlycoprotein Ib platelet subunit alpha. (554 aa)    
Predicted Functional Partners:
ENSECRP00000030757
annotation not available
   
 0.975
gp1bb
Glycoprotein Ib platelet subunit beta.
   
 0.971
ENSECRP00000030780
annotation not available
   
 0.971
dag1
Dystroglycan 1.
     
 0.887
gp5
Glycoprotein V platelet.
  
0.886
vwf
Von Willebrand factor.
    
 0.869
sspo
SCO-spondin.
    
 0.869
otogl
Otogelin like.
    
 0.869
ENSECRP00000026386
annotation not available
    
 0.869
flnc
Filamin C.
    
 0.826
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.