STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a11Solute carrier family 25 member 11. (300 aa)    
Predicted Functional Partners:
LOC114667105
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like.
   
  
 0.789
ndufv1
NADH:ubiquinone oxidoreductase core subunit V1.
   
  
 0.740
LOC114659398
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.723
ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
   
    0.700
ndufa9
NADH:ubiquinone oxidoreductase subunit A9.
   
   0.663
mrpl12
Mitochondrial ribosomal protein L12.
   
 0.659
ENSECRP00000033664
annotation not available
   
 
 0.621
mdh2
Malate dehydrogenase 2.
   
  
 0.611
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
   
 
 0.609
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
   
 
 0.572
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.