STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zc3h15Zinc finger CCCH-type containing 15. (427 aa)    
Predicted Functional Partners:
drg1
Developmentally regulated GTP binding protein 1.
   
 
 0.997
drg2
Developmentally regulated GTP binding protein 2.
   
 
 0.967
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.900
LOC114666740
Ubiquitin-like protein FUBI.
    
   0.900
dnajc2
DnaJ heat shock protein family (Hsp40) member C2.
   
   0.877
rps15
Ribosomal protein S15.
   
   0.850
rpl23a
Ribosomal protein L23a.
   
   0.849
rps12
Ribosomal protein S12.
   
   0.841
rps7
Ribosomal protein S7.
   
   0.841
rps13
Ribosomal protein S13.
   
   0.839
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.