STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114646514NAD kinase-like. (459 aa)    
Predicted Functional Partners:
nadsyn1
NAD synthetase 1.
    
 0.925
nadk2
NAD kinase 2, mitochondrial.
     
 0.909
ENSECRP00000009957
annotation not available
  
 
 0.909
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
  
 
 0.909
malsu1
Mitochondrial assembly of ribosomal large subunit 1.
    
 0.897
sirt1
Sirtuin 1.
  
 
 0.885
sirt5
Sirtuin 5.
  
 
 0.882
nnt
Nicotinamide nucleotide transhydrogenase.
   
 0.876
sirt3
Sirtuin 3.
  
 
 0.874
sirt2
Sirtuin 2.
  
 
 0.874
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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