STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114657625Zinc finger CCHC domain-containing protein 14-like. (812 aa)    
Predicted Functional Partners:
ENSECRP00000010523
annotation not available
 
 
  
 0.904
tent4a
Terminal nucleotidyltransferase 4A.
   
 0.823
tent4b
Terminal nucleotidyltransferase 4B.
   
 0.823
mtrex
Mtr4 exosome RNA helicase.
   
 0.771
zc3h15
Zinc finger CCCH-type containing 15.
   
   0.583
gtpbp4
GTP binding protein 4.
   
   0.546
skiv2l
Ski2 like RNA helicase.
   
 0.541
mak16
MAK16 homolog.
   
   0.539
ipo8
Importin 8.
   
 0.532
ipo7
Importin 7.
   
 0.532
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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