STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000010702annotation not available (788 aa)    
Predicted Functional Partners:
rspo1
R-spondin 1.
    
 0.946
rspo3
R-spondin 3.
    
 0.907
fshb
Follicle stimulating hormone subunit beta.
   
 0.899
ENSECRP00000014839
annotation not available
    
 0.891
rspo2
R-spondin 2.
    
 0.888
tshb
Thyroid stimulating hormone subunit beta.
    
 0.873
ENSECRP00000004917
annotation not available
  
 
0.863
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
  
 
0.862
ENSECRP00000011256
annotation not available
   
 
  0.848
LOC114661359
Gonadotropin subunit beta-like.
   
 0.824
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.