STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp6v1b2ATPase H+ transporting V1 subunit B2. (511 aa)    
Predicted Functional Partners:
atp6v1e1
ATPase H+ transporting V1 subunit E1.
  
 0.996
atp6v1d
ATPase H+ transporting V1 subunit D.
 
 0.996
atp6v1f
ATPase H+ transporting V1 subunit F.
  
 0.995
atp6v1h
ATPase H+ transporting V1 subunit H.
   
 0.994
atp6v0b
ATPase H+ transporting V0 subunit b.
  
 0.991
atp6v0c
ATPase H+ transporting V0 subunit c.
  
 0.991
atp6v1a
ATPase H+ transporting V1 subunit A.
 
0.990
ENSECRP00000013329
annotation not available
 
0.990
LOC114653196
V-type proton ATPase subunit d 2-like.
  
 0.989
LOC114657483
V-type proton ATPase subunit d 1.
  
 0.989
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.