STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114650523Tail-anchored protein insertion receptor WRB-like. (170 aa)    
Predicted Functional Partners:
get3
Guided entry of tail-anchored proteins factor 3, ATPase.
    
 0.999
camlg
Calcium modulating ligand.
    
 0.997
sec61b
SEC61 translocon beta subunit.
    
 0.802
get4
Guided entry of tail-anchored proteins factor 4.
    
 0.748
tmem208
Transmembrane protein 208.
    
 
 0.656
sgtb
Small glutamine rich tetratricopeptide repeat containing beta.
    
 0.656
sgta
Small glutamine rich tetratricopeptide repeat containing alpha.
    
 0.656
gart
annotation not available
      
 0.609
emc6
ER membrane protein complex subunit 6.
    
 
 0.602
ubl4a
Ubiquitin like 4A.
    
 0.583
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.