STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo1cMyosin IC. (1044 aa)    
Predicted Functional Partners:
myo1b
Myosin IB.
    
0.967
myo6
Myosin VI.
    
 
0.951
ENSECRP00000009191
annotation not available
    
0.944
myo3b
Myosin IIIB.
    
0.944
LOC114654330
myosin-IIIb-like.
    
0.941
apc
APC regulator of WNT signaling pathway.
    
 0.810
apc2
APC regulator of WNT signaling pathway 2.
    
 0.810
ENSECRP00000023353
annotation not available
    
0.805
myo9a
Myosin IXA.
    
0.805
polr1e
RNA polymerase I subunit E.
    
  0.796
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.