STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000011062annotation not available (87 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.834
ENSECRP00000009191
annotation not available
   
 0.769
myo3b
Myosin IIIB.
   
 0.769
LOC114654330
myosin-IIIb-like.
   
 0.769
LOC114650950
E3 SUMO-protein ligase RanBP2-like.
  
 0.662
LOC114661378
WD repeat-containing protein 90-like.
   
 
 0.642
xpc
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.640
ENSECRP00000023353
annotation not available
    
 0.615
myo9a
Myosin IXA.
    
 0.615
tnni2
Troponin I2, fast skeletal type.
   
 0.610
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.