STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114655860Ras GTPase-activating protein 4-like. (806 aa)    
Predicted Functional Partners:
mras
Muscle RAS oncogene homolog.
    
 0.851
rras2
RAS related 2.
    
 0.742
LOC114660716
Ras-related protein R-Ras2-like.
    
 0.742
spry2
Sprouty RTK signaling antagonist 2.
    
  0.700
rit1
Ras like without CAAX 1.
    
 0.674
rasa1
RAS p21 protein activator 1.
    
0.671
hras
HRas proto-oncogene, GTPase.
    
 0.657
kras
KRAS proto-oncogene, GTPase.
    
 0.657
csde1
Cold shock domain containing E1.
    
 0.657
nras
NRAS proto-oncogene, GTPase.
    
 0.657
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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