STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem82Transmembrane protein 82. (347 aa)    
Predicted Functional Partners:
slc25a34
Solute carrier family 25 member 34.
 
    
 0.607
cep41
Centrosomal protein 41.
      
 0.557
sh3bp4
SH3 domain binding protein 4.
      
 0.556
ntan1
N-terminal asparagine amidase.
      
 0.554
snph
Syntaphilin.
      
 0.548
fblim1
Filamin binding LIM protein 1.
 
    
 0.473
cep78
Centrosomal protein 78.
      
 0.461
slc25a35
Solute carrier family 25 member 35.
 
    
 0.454
LOC114651647
Zinc finger protein 638-like.
      
 0.428
macc1
MET transcriptional regulator MACC1.
      
 0.410
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]