STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot11acyl-CoA thioesterase 11. (583 aa)    
Predicted Functional Partners:
sucla2
succinate-CoA ligase ADP-forming beta subunit.
    
 0.840
suclg2
succinate-CoA ligase GDP-forming beta subunit.
  
 
 0.837
dlat
Dihydrolipoamide S-acetyltransferase.
    
  0.833
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
   
 0.826
aldh9a1
Aldehyde dehydrogenase 9 family member A1.
   
 0.826
suclg1
succinate-CoA ligase alpha subunit.
    
  0.819
rubcnl
Rubicon like autophagy enhancer.
   
    0.753
c14h1orf109
Chromosome 14 C1orf109 homolog.
   
    0.753
ENSECRP00000031930
annotation not available
   
    0.753
cryl1
Crystallin lambda 1.
  
 
 0.742
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.