STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000011452annotation not available (210 aa)    
Predicted Functional Partners:
dnal4
Dynein axonemal light chain 4.
   
 0.742
ENSECRP00000023634
annotation not available
   
 0.742
ENSECRP00000008286
annotation not available
  
  
 0.714
ENSECRP00000002573
annotation not available
  
  
 0.684
dnai2
Dynein axonemal intermediate chain 2.
   
 
 0.684
LOC114664422
Dynein intermediate chain 2, axonemal-like.
   
 
 0.684
ccdc65
Coiled-coil domain containing 65.
    
 0.681
dnal1
Dynein axonemal light chain 1.
   
 
 0.663
ENSECRP00000007548
annotation not available
   
 0.657
LOC114655537
Dynein light chain 2, cytoplasmic.
   
 0.657
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.