STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114654447Ribonuclease P protein subunit p14-like. (127 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2.
   
 0.984
acox1
acyl-CoA oxidase 1.
  
 0.958
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.954
pop1
POP1 homolog, ribonuclease P/MRP subunit.
     
 0.935
cat
Catalase.
  
 0.934
rpp40
Ribonuclease P/MRP subunit p40.
    
  0.932
pop4
POP4 homolog, ribonuclease P/MRP subunit.
     
 0.932
ENSECRP00000020973
annotation not available
    
 0.932
acox3
acyl-CoA oxidase 3, pristanoyl.
  
 0.926
LOC114651749
Malate synthase-like.
  
 
 0.918
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.