STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114655413Probable flavin-containing monoamine oxidase A. (555 aa)    
Predicted Functional Partners:
glyr1
Glyoxylate reductase 1 homolog.
    
 
 0.936
comt
catechol-O-methyltransferase.
    
 0.892
LOC114649970
Transmembrane O-methyltransferase homolog.
    
 0.882
aoc1
Amine oxidase copper containing 1.
  
 
 0.882
aoc3
Amine oxidase copper containing 3.
  
 
 0.882
LOC114668691
Aldehyde dehydrogenase family 3 member B1-like.
    
 0.875
ENSECRP00000015177
annotation not available
    
 0.863
LOC114654921
Glyoxylate reductase/hydroxypyruvate reductase-like.
  
 
 0.861
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.859
aldh9a1
Aldehyde dehydrogenase 9 family member A1.
   
 0.859
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.