STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pan3poly(A) specific ribonuclease subunit PAN3. (824 aa)    
Predicted Functional Partners:
pan2
poly(A) specific ribonuclease subunit PAN2.
    
 0.999
ENSECRP00000001573
annotation not available
    
 0.931
LOC114659504
Embryonic polyadenylate-binding protein A-like.
    
 0.931
pabpc4
poly(A) binding protein cytoplasmic 4.
    
 0.931
LOC114641917
Polyadenylate-binding protein 1.
    
 0.931
isg20l2
Interferon stimulated exonuclease gene 20 like 2.
    
 0.921
LOC114654476
RNA exonuclease 1 homolog.
    
 0.921
ENSECRP00000014959
annotation not available
    
 0.921
rexo5
RNA exonuclease 5.
    
 0.921
rexo4
REX4 homolog, 3'-5' exonuclease.
    
 0.921
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.