STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000011576annotation not available (543 aa)    
Predicted Functional Partners:
LOC114642283
Catenin alpha-1-like.
 
     0.921
vcl
Vinculin.
    
0.901
ENSECRP00000011616
annotation not available
 
      0.900
ENSECRP00000025561
annotation not available
 
      0.899
ctnnb1
Catenin beta 1.
   
 0.891
jup
Junction plakoglobin.
   
 0.872
afdn
Afadin, adherens junction formation factor.
    
 0.785
LOC114654415
Talin-1-like.
   
 0.783
tlnrd1
Talin rod domain containing 1.
   
 0.783
tln2
Talin 2.
   
 0.783
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.