STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a9Solute carrier family 38 member 9. (560 aa)    
Predicted Functional Partners:
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.999
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.999
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.999
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
    
 0.998
LOC114662487
Ras-related GTP-binding protein A.
   
 0.980
rragd
Ras related GTP binding D.
    
 0.939
rragc
Ras related GTP binding C.
    
 0.939
c9orf72
C9orf72-SMCR8 complex subunit.
    
  0.936
wdr41
WD repeat domain 41.
    
 0.933
ric1
RIC1 homolog, RAB6A GEF complex partner 1.
    
  0.932
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.